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src/mesh/GmshReader.cpp

+84 −40
Original line number Original line Diff line number Diff line
@@ -39,7 +39,8 @@ GmshConnectivityBuilder<1>::GmshConnectivityBuilder(const GmshReader::GmshData& 
  Array<int> cell_number_vector(nb_cells);

  Array<int> cell_number_vector(nb_cells);





  Array<unsigned int> cell_to_node_row(nb_cells + 1);

  Array<unsigned int> cell_to_node_row(nb_cells + 1);

  parallel_for(cell_to_node_row.size(), PUGS_LAMBDA(const CellId cell_id) { cell_to_node_row[cell_id] = 2 * cell_id; });

  parallel_for(

    cell_to_node_row.size(), PUGS_LAMBDA(const CellId cell_id) { cell_to_node_row[cell_id] = 2 * cell_id; });





  Array<unsigned int> cell_to_node_list(cell_to_node_row[cell_to_node_row.size() - 1]);

  Array<unsigned int> cell_to_node_list(cell_to_node_row[cell_to_node_row.size() - 1]);

  for (CellId cell_id = 0; cell_id < nb_cells; ++cell_id) {

  for (CellId cell_id = 0; cell_id < nb_cells; ++cell_id) {
@@ -62,7 +63,10 @@ GmshConnectivityBuilder<1>::GmshConnectivityBuilder(const GmshReader::GmshData& 




  for (unsigned int r = 0; r < gmsh_data.point_entity.size(); ++r) {

  for (unsigned int r = 0; r < gmsh_data.point_entity.size(); ++r) {

    const unsigned int point_number = gmsh_data.point_entity[r];

    const unsigned int point_number = gmsh_data.point_entity[r];

    ref_points_map[gmsh_data.point_entity_ref[r]].push_back(point_number);

    auto ref_range                  = point_to_physical_tag.equal_range(gmsh_data.point_entity_ref[r]);

    for (auto i_ref = ref_range.first; i_ref != ref_range.second; ++i_ref) {

      ref_points_map[i_ref->second].push_back(point_number);

    }

  }

  }





  Array<size_t> node_nb_cell(descriptor.nodeNumberVector().size());

  Array<size_t> node_nb_cell(descriptor.nodeNumberVector().size());
@@ -125,7 +129,10 @@ GmshConnectivityBuilder<1>::GmshConnectivityBuilder(const GmshReader::GmshData& 




  for (unsigned int j = 0; j < gmsh_data.edge_entity_ref.size(); ++j) {

  for (unsigned int j = 0; j < gmsh_data.edge_entity_ref.size(); ++j) {

    const unsigned int elem_number = j;

    const unsigned int elem_number = j;

    ref_cells_map[gmsh_data.edge_entity_ref[j]].push_back(elem_number);

    auto ref_range                 = cell_to_physical_tag.equal_range(gmsh_data.edge_entity_ref[j]);

    for (auto i_ref = ref_range.first; i_ref != ref_range.second; ++i_ref) {

      ref_cells_map[i_ref->second].push_back(elem_number);