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code
pugs
Commits
854497eb
Commit
854497eb
authored
Jul 18, 2018
by
Stéphane Del Pino
Browse files
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Plain Diff
Define NodeValuePerCell
NodeValuePerCell<DataType> is an alias to SubItemValuePerItem<Datatype,node,cell>
parent
e24dbb69
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1 merge request
!6
Feature/crs
Changes
3
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3 changed files
src/mesh/MeshData.hpp
+20
-20
20 additions, 20 deletions
src/mesh/MeshData.hpp
src/scheme/AcousticSolver.hpp
+68
-68
68 additions, 68 deletions
src/scheme/AcousticSolver.hpp
src/scheme/SubItemValuePerItem.hpp
+29
-16
29 additions, 16 deletions
src/scheme/SubItemValuePerItem.hpp
with
117 additions
and
104 deletions
src/mesh/MeshData.hpp
+
20
−
20
View file @
854497eb
...
...
@@ -23,9 +23,9 @@ public:
private:
const
MeshType
&
m_mesh
;
SubItem
ValuePer
Item
<
Rd
>
m_Cjr
;
SubItem
ValuePer
Item
<
double
>
m_ljr
;
SubItem
ValuePer
Item
<
Rd
>
m_njr
;
Node
ValuePer
Cell
<
Rd
>
m_Cjr
;
Node
ValuePer
Cell
<
double
>
m_ljr
;
Node
ValuePer
Cell
<
Rd
>
m_njr
;
Kokkos
::
View
<
Rd
*>
m_xj
;
Kokkos
::
View
<
double
*>
m_Vj
;
...
...
@@ -88,12 +88,12 @@ private:
}
});
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
=
m_Cjr
;
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
=
m_Cjr
;
Kokkos
::
parallel_for
(
m_Cjr
.
numberOfValues
(),
KOKKOS_LAMBDA
(
const
int
&
j
){
m_ljr
[
j
]
=
l2Norm
(
Cjr
[
j
]);
});
const
SubItem
ValuePer
Item
<
double
>&
ljr
=
m_ljr
;
const
Node
ValuePer
Cell
<
double
>&
ljr
=
m_ljr
;
Kokkos
::
parallel_for
(
m_Cjr
.
numberOfValues
(),
KOKKOS_LAMBDA
(
const
int
&
j
){
m_njr
[
j
]
=
(
1.
/
ljr
[
j
])
*
Cjr
[
j
];
});
...
...
@@ -150,12 +150,12 @@ private:
}
});
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
=
m_Cjr
;
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
=
m_Cjr
;
Kokkos
::
parallel_for
(
m_Cjr
.
numberOfValues
(),
KOKKOS_LAMBDA
(
const
int
&
j
){
m_ljr
[
j
]
=
l2Norm
(
Cjr
[
j
]);
});
const
SubItem
ValuePer
Item
<
double
>&
ljr
=
m_ljr
;
const
Node
ValuePer
Cell
<
double
>&
ljr
=
m_ljr
;
Kokkos
::
parallel_for
(
m_Cjr
.
numberOfValues
(),
KOKKOS_LAMBDA
(
const
int
&
j
){
m_njr
[
j
]
=
(
1.
/
ljr
[
j
])
*
Cjr
[
j
];
});
...
...
@@ -169,17 +169,17 @@ public:
return
m_mesh
;
}
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
()
const
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
()
const
{
return
m_Cjr
;
}
const
SubItem
ValuePer
Item
<
double
>&
ljr
()
const
const
Node
ValuePer
Cell
<
double
>&
ljr
()
const
{
return
m_ljr
;
}
const
SubItem
ValuePer
Item
<
Rd
>&
njr
()
const
const
Node
ValuePer
Cell
<
Rd
>&
njr
()
const
{
return
m_njr
;
}
...
...
This diff is collapsed.
Click to expand it.
src/scheme/AcousticSolver.hpp
+
68
−
68
View file @
854497eb
...
...
@@ -82,9 +82,9 @@ private:
KOKKOS_INLINE_FUNCTION
void
computeAjr
(
const
Kokkos
::
View
<
const
double
*>&
rhocj
,
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
,
const
SubItem
ValuePer
Item
<
double
>&
ljr
,
const
SubItem
ValuePer
Item
<
Rd
>&
njr
)
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
,
const
Node
ValuePer
Cell
<
double
>&
ljr
,
const
Node
ValuePer
Cell
<
Rd
>&
njr
)
{
Kokkos
::
parallel_for
(
"new nested Ajr"
,
m_mesh
.
numberOfCells
(),
KOKKOS_LAMBDA
(
const
int
&
j
)
{
const
size_t
&
nb_nodes
=
m_Ajr
.
numberOfSubValues
(
j
);
...
...
@@ -97,7 +97,7 @@ private:
KOKKOS_INLINE_FUNCTION
const
Kokkos
::
View
<
const
Rdd
*>
computeAr
(
const
SubItem
ValuePer
Item
<
Rdd
>&
Ajr
)
{
computeAr
(
const
Node
ValuePer
Cell
<
Rdd
>&
Ajr
)
{
Kokkos
::
parallel_for
(
m_mesh
.
numberOfNodes
(),
KOKKOS_LAMBDA
(
const
int
&
r
)
{
Rdd
sum
=
zero
;
const
auto
&
node_to_cell
=
m_connectivity
.
m_node_to_cell_matrix
.
rowConst
(
r
);
...
...
@@ -115,8 +115,8 @@ private:
KOKKOS_INLINE_FUNCTION
const
Kokkos
::
View
<
const
Rd
*>
computeBr
(
const
SubItem
ValuePer
Item
<
Rdd
>&
Ajr
,
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
,
computeBr
(
const
Node
ValuePer
Cell
<
Rdd
>&
Ajr
,
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
,
const
Kokkos
::
View
<
const
Rd
*>&
uj
,
const
Kokkos
::
View
<
const
double
*>&
pj
)
{
Kokkos
::
parallel_for
(
m_mesh
.
numberOfNodes
(),
KOKKOS_LAMBDA
(
const
int
&
r
)
{
...
...
@@ -190,9 +190,9 @@ private:
}
void
computeFjr
(
const
SubItem
ValuePer
Item
<
Rdd
>&
Ajr
,
computeFjr
(
const
Node
ValuePer
Cell
<
Rdd
>&
Ajr
,
const
Kokkos
::
View
<
const
Rd
*>&
ur
,
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
,
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
,
const
Kokkos
::
View
<
const
Rd
*>&
uj
,
const
Kokkos
::
View
<
const
double
*>&
pj
)
{
...
...
@@ -221,9 +221,9 @@ private:
const
Kokkos
::
View
<
const
double
*>&
pj
,
const
Kokkos
::
View
<
const
double
*>&
cj
,
const
Kokkos
::
View
<
const
double
*>&
Vj
,
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
,
const
SubItem
ValuePer
Item
<
double
>&
ljr
,
const
SubItem
ValuePer
Item
<
Rd
>&
njr
)
{
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
,
const
Node
ValuePer
Cell
<
double
>&
ljr
,
const
Node
ValuePer
Cell
<
Rd
>&
njr
)
{
const
Kokkos
::
View
<
const
double
*>
rhocj
=
computeRhoCj
(
rhoj
,
cj
);
computeAjr
(
rhocj
,
Cjr
,
ljr
,
njr
);
...
...
@@ -238,10 +238,10 @@ private:
}
Kokkos
::
View
<
Rd
*>
m_br
;
SubItem
ValuePer
Item
<
Rdd
>
m_Ajr
;
Node
ValuePer
Cell
<
Rdd
>
m_Ajr
;
Kokkos
::
View
<
Rdd
*>
m_Ar
;
Kokkos
::
View
<
Rdd
*>
m_inv_Ar
;
SubItem
ValuePer
Item
<
Rd
>
m_Fjr
;
Node
ValuePer
Cell
<
Rd
>
m_Fjr
;
Kokkos
::
View
<
Rd
*>
m_ur
;
Kokkos
::
View
<
double
*>
m_rhocj
;
Kokkos
::
View
<
double
*>
m_Vj_over_cj
;
...
...
@@ -270,7 +270,7 @@ public:
double
acoustic_dt
(
const
Kokkos
::
View
<
const
double
*>&
Vj
,
const
Kokkos
::
View
<
const
double
*>&
cj
)
const
{
const
SubItem
ValuePer
Item
<
double
>&
ljr
=
m_mesh_data
.
ljr
();
const
Node
ValuePer
Cell
<
double
>&
ljr
=
m_mesh_data
.
ljr
();
Kokkos
::
parallel_for
(
m_mesh
.
numberOfCells
(),
KOKKOS_LAMBDA
(
const
int
&
j
){
const
auto
&
cell_nodes
=
m_mesh
.
connectivity
().
m_cell_to_node_matrix
.
rowConst
(
j
);
...
...
@@ -303,14 +303,14 @@ public:
const
Kokkos
::
View
<
const
Rd
*>
xj
=
m_mesh_data
.
xj
();
const
Kokkos
::
View
<
const
double
*>
Vj
=
m_mesh_data
.
Vj
();
const
SubItem
ValuePer
Item
<
Rd
>&
Cjr
=
m_mesh_data
.
Cjr
();
const
SubItem
ValuePer
Item
<
double
>&
ljr
=
m_mesh_data
.
ljr
();
const
SubItem
ValuePer
Item
<
Rd
>&
njr
=
m_mesh_data
.
njr
();
const
Node
ValuePer
Cell
<
Rd
>&
Cjr
=
m_mesh_data
.
Cjr
();
const
Node
ValuePer
Cell
<
double
>&
ljr
=
m_mesh_data
.
ljr
();
const
Node
ValuePer
Cell
<
Rd
>&
njr
=
m_mesh_data
.
njr
();
Kokkos
::
View
<
Rd
*>
xr
=
m_mesh
.
xr
();
computeExplicitFluxes
(
xr
,
xj
,
rhoj
,
uj
,
pj
,
cj
,
Vj
,
Cjr
,
ljr
,
njr
);
const
SubItem
ValuePer
Item
<
Rd
>&
Fjr
=
m_Fjr
;
const
Node
ValuePer
Cell
<
Rd
>&
Fjr
=
m_Fjr
;
const
Kokkos
::
View
<
const
Rd
*>
ur
=
m_ur
;
const
Kokkos
::
View
<
const
double
*>
inv_mj
=
unknowns
.
invMj
();
...
...
This diff is collapsed.
Click to expand it.
src/scheme/SubItemValuePerItem.hpp
+
29
−
16
View file @
854497eb
...
...
@@ -7,12 +7,21 @@
typedef
Kokkos
::
StaticCrsGraph
<
unsigned
int
,
Kokkos
::
HostSpace
>
ConnectivityMatrix
;
template
<
typename
DataType
>
enum
class
TypeOfItem
{
node
,
edge
,
face
,
cell
};
template
<
typename
DataType
,
TypeOfItem
SubItemType
,
TypeOfItem
ItemType
>
class
SubItemValuePerItem
{
#warning should eventually filter const from DataType
private:
ConnectivityMatrix
m_
node
_id_per_
cell
_matrix
;
ConnectivityMatrix
m_
subitem
_id_per_
item
_matrix
;
Kokkos
::
View
<
DataType
*>
m_values
;
...
...
@@ -101,13 +110,13 @@ class SubItemValuePerItem
KOKKOS_FORCEINLINE_FUNCTION
DataType
&
operator
()(
const
size_t
&
j
,
const
size_t
&
r
)
{
return
m_values
[
m_
node
_id_per_
cell
_matrix
.
row_map
[
j
]
+
r
];
return
m_values
[
m_
subitem
_id_per_
item
_matrix
.
row_map
[
j
]
+
r
];
}
KOKKOS_FORCEINLINE_FUNCTION
const
DataType
&
operator
()(
const
size_t
&
j
,
const
size_t
&
r
)
const
{
return
m_values
[
m_
node
_id_per_
cell
_matrix
.
row_map
[
j
]
+
r
];
return
m_values
[
m_
subitem
_id_per_
item
_matrix
.
row_map
[
j
]
+
r
];
}
KOKKOS_INLINE_FUNCTION
...
...
@@ -129,37 +138,37 @@ class SubItemValuePerItem
}
KOKKOS_INLINE_FUNCTION
size_t
numberOf
Entitie
s
()
const
size_t
numberOf
Item
s
()
const
{
return
m_
node
_id_per_
cell
_matrix
.
numRows
();
return
m_
subitem
_id_per_
item
_matrix
.
numRows
();
}
KOKKOS_INLINE_FUNCTION
size_t
numberOfSubValues
(
const
size_t
&
i_cell
)
const
{
return
m_
node
_id_per_
cell
_matrix
.
row_map
[
i_cell
+
1
]
-
m_
node
_id_per_
cell
_matrix
.
row_map
[
i_cell
];
return
m_
subitem
_id_per_
item
_matrix
.
row_map
[
i_cell
+
1
]
-
m_
subitem
_id_per_
item
_matrix
.
row_map
[
i_cell
];
}
KOKKOS_INLINE_FUNCTION
SubView
cell
Values
(
const
size_t
&
i_cell
)
SubView
item
Values
(
const
size_t
&
i_cell
)
{
const
ConnectivityMatrix
::
size_type
&
cell_begin
=
m_
node
_id_per_
cell
_matrix
.
row_map
[
i_cell
];
const
ConnectivityMatrix
::
size_type
&
cell_end
=
m_
node
_id_per_
cell
_matrix
.
row_map
[
i_cell
+
1
];
const
ConnectivityMatrix
::
size_type
&
cell_begin
=
m_
subitem
_id_per_
item
_matrix
.
row_map
[
i_cell
];
const
ConnectivityMatrix
::
size_type
&
cell_end
=
m_
subitem
_id_per_
item
_matrix
.
row_map
[
i_cell
+
1
];
return
SubView
(
m_values
,
cell_begin
,
cell_end
);
}
KOKKOS_INLINE_FUNCTION
SubViewConst
cell
Values
(
const
size_t
&
i_cell
)
const
SubViewConst
item
Values
(
const
size_t
&
i_cell
)
const
{
const
ConnectivityMatrix
::
size_type
&
cell_begin
=
m_
node
_id_per_
cell
_matrix
.
row_map
[
i_cell
];
const
ConnectivityMatrix
::
size_type
&
cell_end
=
m_
node
_id_per_
cell
_matrix
.
row_map
[
i_cell
+
1
];
const
ConnectivityMatrix
::
size_type
&
cell_begin
=
m_
subitem
_id_per_
item
_matrix
.
row_map
[
i_cell
];
const
ConnectivityMatrix
::
size_type
&
cell_end
=
m_
subitem
_id_per_
item
_matrix
.
row_map
[
i_cell
+
1
];
return
SubViewConst
(
m_values
,
cell_begin
,
cell_end
);
}
SubItemValuePerItem
()
=
default
;
SubItemValuePerItem
(
const
ConnectivityMatrix
&
node
_id_per_
cell
_matrix
)
:
m_
node
_id_per_
cell
_matrix
(
node
_id_per_
cell
_matrix
),
m_values
(
"values"
,
m_
node
_id_per_
cell
_matrix
.
entries
.
extent
(
0
))
SubItemValuePerItem
(
const
ConnectivityMatrix
&
subitem
_id_per_
item
_matrix
)
:
m_
subitem
_id_per_
item
_matrix
(
subitem
_id_per_
item
_matrix
),
m_values
(
"values"
,
m_
subitem
_id_per_
item
_matrix
.
entries
.
extent
(
0
))
{
;
}
...
...
@@ -167,4 +176,8 @@ class SubItemValuePerItem
~
SubItemValuePerItem
()
=
default
;
};
template
<
typename
DataType
>
using
NodeValuePerCell
=
SubItemValuePerItem
<
DataType
,
TypeOfItem
::
node
,
TypeOfItem
::
cell
>
;
#endif // SUBITEM_VALUE_PER_ITEM_HPP
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