#pragma once #include <H5Dpublic.h> #include <H5Ipublic.h> namespace HighFive { namespace detail { #if !H5_VERSION_GE(1, 12, 0) inline herr_t h5d_vlen_reclaim(hid_t type_id, hid_t space_id, hid_t dxpl_id, void* buf) { herr_t err = H5Dvlen_reclaim(type_id, space_id, dxpl_id, buf); if (err < 0) { throw DataSetException("Failed to reclaim HDF5 internal memory"); } return err; } #endif inline hsize_t h5d_get_storage_size(hid_t dset_id) { // Docs: // H5Dget_storage_size() does not differentiate between 0 (zero), the // value returned for the storage size of a dataset with no stored values, // and 0 (zero), the value returned to indicate an error. return H5Dget_storage_size(dset_id); } inline hid_t h5d_get_space(hid_t dset_id) { hid_t dset = H5Dget_space(dset_id); if (dset == H5I_INVALID_HID) { HDF5ErrMapper::ToException<DataSetException>( std::string("Unable to get dataspace of the dataset")); } return dset; } inline hid_t h5d_get_type(hid_t dset_id) { hid_t type_id = H5Dget_type(dset_id); if (type_id == H5I_INVALID_HID) { HDF5ErrMapper::ToException<DataSetException>( std::string("Unable to get datatype of the dataset")); } return type_id; } inline herr_t h5d_read(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t dxpl_id, void* buf) { herr_t err = H5Dread(dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf); if (err < 0) { HDF5ErrMapper::ToException<DataSetException>(std::string("Unable to read the dataset")); } return err; } inline herr_t h5d_write(hid_t dset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t dxpl_id, const void* buf) { herr_t err = H5Dwrite(dset_id, mem_type_id, mem_space_id, file_space_id, dxpl_id, buf); if (err < 0) { HDF5ErrMapper::ToException<DataSetException>(std::string("Unable to write the dataset")); } return err; } inline haddr_t h5d_get_offset(hid_t dset_id) { uint64_t addr = H5Dget_offset(dset_id); if (addr == HADDR_UNDEF) { HDF5ErrMapper::ToException<DataSetException>("Cannot get offset of DataSet."); } return addr; } inline herr_t h5d_set_extent(hid_t dset_id, const hsize_t size[]) { herr_t err = H5Dset_extent(dset_id, size); if (err < 0) { HDF5ErrMapper::ToException<DataSetException>("Could not resize dataset."); } return err; } inline hid_t h5d_create2(hid_t loc_id, const char* name, hid_t type_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id) { hid_t dataset_id = H5Dcreate2(loc_id, name, type_id, space_id, lcpl_id, dcpl_id, dapl_id); if (dataset_id == H5I_INVALID_HID) { HDF5ErrMapper::ToException<DataSetException>( std::string("Failed to create the dataset \"") + name + "\":"); } return dataset_id; } inline hid_t h5d_open2(hid_t loc_id, const char* name, hid_t dapl_id) { hid_t dataset_id = H5Dopen2(loc_id, name, dapl_id); if (dataset_id == H5I_INVALID_HID) { HDF5ErrMapper::ToException<DataSetException>(std::string("Unable to open the dataset \"") + name + "\":"); } return dataset_id; } } // namespace detail } // namespace HighFive